A Prototype of a Rice Proteomics Data Consolidation and Visualization System

Abstract

As rice is one of the primary sources of energy consumed by 50% of the world's population, numerous rice research and development projects aim to increase rice productivity and improve insect-pest and disease resistance, among other goals. In this paper, we propose a system prototype to enhance rice research and development processes — specifically, the study of proteins in rice — viewing the integration of information retrieval and data visualization as an advocate for this research. One necessary task is retrieving proteomic information from online databases, a process that has heavily relied on human effort to access and manually retrieve information; thousands of proteins are typically retrieved in proteomics research, which hinders data analysis, interpretation, and visualization. To address this problem, we propose a prototype for a rice proteomic data consolidation and visualization system.

Keywords: proteins, data visualization, prototypes, proteomics, information retrieval, information technology

References

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@inproceedings{2024_Sanchan_Narawatthana,
  author    = {Sanchan, Nattapong and Narawatthana, Supatthra},
  booktitle = {2024 8th International Conference on Information Technology (InCIT)},
  title     = {A Prototype of a Rice Proteomics Data Consolidation and Visualization System},
  year      = {2024},
  pages     = {34--39},
  doi       = {10.1109/InCIT63192.2024.10810529}
}

Sanchan, N., & Narawatthana, S. (2024). A Prototype of a Rice Proteomics Data Consolidation and Visualization System. In Proceedings of the 2024 8th International Conference on Information Technology (InCIT), Kanazawa, Japan, 2024, pp. 34–39, doi: 10.1109/InCIT63192.2024.10810529.